From 413eb3e49f0a7ac28325b62e9d46a4b45cb1d92b Mon Sep 17 00:00:00 2001
From: Flash <Flash@163.com>
Date: Sun, 27 Jul 2025 20:20:20 +0800
Subject: [PATCH] CS19 REPAIR

---
 embryo-backend/Data/CS19.glb      |  4 +--
 embryo-backend/Data/CS19.h5ad     |  2 +-
 embryo-backend/Data/CS19_old.glb  |  3 +++
 embryo-backend/Data/CS19repair.py | 42 +++++++++++++++++++++++++++++++
 embryo-backend/Data/CS23.glb      |  4 +--
 embryo-backend/Data/CS23.h5ad     |  2 +-
 embryo-backend/Data/glbTrans.py   |  2 +-
 7 files changed, 52 insertions(+), 7 deletions(-)
 create mode 100644 embryo-backend/Data/CS19_old.glb
 create mode 100644 embryo-backend/Data/CS19repair.py

diff --git a/embryo-backend/Data/CS19.glb b/embryo-backend/Data/CS19.glb
index f247f45..1680576 100644
--- a/embryo-backend/Data/CS19.glb
+++ b/embryo-backend/Data/CS19.glb
@@ -1,3 +1,3 @@
 version https://git-lfs.github.com/spec/v1
-oid sha256:2605adba0302d83bc10bbfbf766bcf4d8a4c0450b8968f363426e225b4d9d609
-size 4740704
+oid sha256:78bc81e852d6f0545bdf911f3a5b29b42c6f1393f03647bf7f2fd4824cdad0c7
+size 4738028
diff --git a/embryo-backend/Data/CS19.h5ad b/embryo-backend/Data/CS19.h5ad
index 9d1823d..9ddcfc1 100644
--- a/embryo-backend/Data/CS19.h5ad
+++ b/embryo-backend/Data/CS19.h5ad
@@ -1,3 +1,3 @@
 version https://git-lfs.github.com/spec/v1
-oid sha256:40059facd82412865dceea6eba4083351392811c746c071c269fc28050146e5b
+oid sha256:1c1dc70a069db5aac758a9e3f68644689c2e0b062c60089b0717cfcd7aa5537c
 size 122214543
diff --git a/embryo-backend/Data/CS19_old.glb b/embryo-backend/Data/CS19_old.glb
new file mode 100644
index 0000000..8f267db
--- /dev/null
+++ b/embryo-backend/Data/CS19_old.glb
@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:e8af10494e5ecf12b4681846a18a661d71b183da5fb41418d69b29b779419e96
+size 4740704
diff --git a/embryo-backend/Data/CS19repair.py b/embryo-backend/Data/CS19repair.py
new file mode 100644
index 0000000..f8b6a59
--- /dev/null
+++ b/embryo-backend/Data/CS19repair.py
@@ -0,0 +1,42 @@
+import bpy
+import os
+import bmesh
+import mathutils
+
+# ==== 参数 ====
+input_glb = r"C:/Users/lry/Desktop/digital-embryo/embryo-backend/Data/CS19.glb"
+output_glb = r"C:/Users/lry/Desktop/digital-embryo/embryo-backend/Data/CS19_fixed.glb"
+
+# ==== 清空场景 ====
+bpy.ops.object.select_all(action='SELECT')
+bpy.ops.object.delete(use_global=False)
+
+# ==== 导入 GLB ====
+print(f"📥 载入 {input_glb}")
+bpy.ops.import_scene.gltf(filepath=input_glb)
+
+# ==== 强制应用 matrix_world 到每个顶点 ====
+for obj in [o for o in bpy.context.scene.objects if o.type == 'MESH']:
+    bpy.context.view_layer.objects.active = obj
+    obj.select_set(True)
+    
+    # 进入编辑模式
+    bpy.ops.object.mode_set(mode='EDIT')
+    bm = bmesh.from_edit_mesh(obj.data)
+    
+    # 将所有顶点转换到世界坐标
+    for v in bm.verts:
+        v.co = obj.matrix_world @ v.co
+    
+    bmesh.update_edit_mesh(obj.data)
+    bpy.ops.object.mode_set(mode='OBJECT')
+    
+    # 重置 transform（避免重复应用）
+    obj.matrix_world = mathutils.Matrix.Identity(4)
+    obj.select_set(False)
+
+# ==== 导出修复版 GLB ====
+print(f"💾 导出修复版 → {output_glb}")
+bpy.ops.export_scene.gltf(filepath=output_glb, export_format='GLB', export_apply=True)
+
+print("✅ 修复完成！")
diff --git a/embryo-backend/Data/CS23.glb b/embryo-backend/Data/CS23.glb
index 64d0032..6d3c341 100644
--- a/embryo-backend/Data/CS23.glb
+++ b/embryo-backend/Data/CS23.glb
@@ -1,3 +1,3 @@
 version https://git-lfs.github.com/spec/v1
-oid sha256:9de04d8fe8b054146bffe34fa6131cffda902dc83a2b2c4024dd583084e7d48a
-size 12627176
+oid sha256:a47b89bcd9c075449646c781c26f5da2785685f998cb303e777dbe0a31185b9a
+size 62424668
diff --git a/embryo-backend/Data/CS23.h5ad b/embryo-backend/Data/CS23.h5ad
index 625742f..3e37190 100644
--- a/embryo-backend/Data/CS23.h5ad
+++ b/embryo-backend/Data/CS23.h5ad
@@ -1,3 +1,3 @@
 version https://git-lfs.github.com/spec/v1
-oid sha256:59c845b30b64ca8a489d00cffd617b256c4ab79769ce698719a48e5351e74ac2
+oid sha256:9e252bfd9df6c67acce226055b9e354e0bb8d8130d75e860c2ada62d98d2bc27
 size 122222625
diff --git a/embryo-backend/Data/glbTrans.py b/embryo-backend/Data/glbTrans.py
index 3323d16..a2656e3 100644
--- a/embryo-backend/Data/glbTrans.py
+++ b/embryo-backend/Data/glbTrans.py
@@ -6,7 +6,7 @@ import anndata as ad
 
 # ==== 参数 ====
 script_dir = os.path.dirname(os.path.realpath(__file__))
-glb_files = [f"CS{i}.glb" for i in range(11,24,1)]
+glb_files = [f"CS{i}.glb" for i in range(19,20,1)]
 N_total = 30000
 use_surface_sampling = False
 n_genes = 1000